Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm22355-201ENSMUST00000175531 96 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm6064-201ENSMUST00000203999 454 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 AC138284.2-201ENSMUST00000213982 567 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Usp40Q8BWR4 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC7.44□□□□□ -1.22
Usp40Q8BWR4 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm29293-201ENSMUST00000189416 2188 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm14795-201ENSMUST00000118461 471 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm11420-201ENSMUST00000120047 402 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm21990-201ENSMUST00000124692 383 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm24962-201ENSMUST00000157917 109 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm22917-201ENSMUST00000180116 110 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm2053-201ENSMUST00000195671 631 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm17775-201ENSMUST00000198542 258 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm18924-201ENSMUST00000211929 316 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 AC153505.2-201ENSMUST00000217741 277 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 AC154576.2-203ENSMUST00000224736 253 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Usp40Q8BWR4 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm23692-201ENSMUST00000101881 160 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm11912-201ENSMUST00000117235 264 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm13902-201ENSMUST00000120168 605 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm13339-201ENSMUST00000120651 510 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm16179-201ENSMUST00000120685 373 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm7973-201ENSMUST00000122107 488 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm22226-201ENSMUST00000157355 109 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm25413-201ENSMUST00000158544 312 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm17086-201ENSMUST00000171346 484 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm26731-201ENSMUST00000180683 543 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm21654-201ENSMUST00000188086 691 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm38185-201ENSMUST00000193195 694 ntBASIC7.42□□□□□ -1.22
Usp40Q8BWR4 Gm42542-201ENSMUST00000197978 268 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms