Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm7117-201ENSMUST00000071515 387 ntBASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.41□□□□□ -1.54
Ccdc40Q8BI79 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm15428-201ENSMUST00000121352 333 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm25843-201ENSMUST00000122582 314 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Mir1970-201ENSMUST00000157839 104 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm22158-201ENSMUST00000158411 126 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm23116-201ENSMUST00000158481 67 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm23179-201ENSMUST00000158693 304 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm24175-201ENSMUST00000158931 129 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm27820-201ENSMUST00000183628 175 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm27409-201ENSMUST00000184727 80 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm38166-201ENSMUST00000191660 471 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm44817-201ENSMUST00000205416 453 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Gm23508-201ENSMUST00000083079 72 ntBASIC5.4□□□□□ -1.54
Ccdc40Q8BI79 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.4□□□□□ -1.55
Ccdc40Q8BI79 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm23593-201ENSMUST00000104309 120 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm11313-201ENSMUST00000118779 432 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm15034-201ENSMUST00000120043 349 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm11677-201ENSMUST00000121349 977 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm13738-201ENSMUST00000122437 469 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm17091-201ENSMUST00000163248 357 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm3091-201ENSMUST00000163408 484 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Mir3097-201ENSMUST00000175356 67 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm18969-201ENSMUST00000189423 730 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm5750-201ENSMUST00000218711 801 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.39□□□□□ -1.55
Ccdc40Q8BI79 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Svet1-201ENSMUST00000209370 3940 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm5383-201ENSMUST00000121177 617 ntBASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc40Q8BI79 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms