Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Gm24251-201ENSMUST00000157324 114 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Gm23391-201ENSMUST00000157579 104 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Gm24507-201ENSMUST00000157683 134 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Gm37828-201ENSMUST00000192496 432 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 AC154305.1-201ENSMUST00000224443 450 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Shank3Q4ACU6 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.15□□□□□ -1.43
Shank3Q4ACU6 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm24581-201ENSMUST00000103962 133 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm6071-201ENSMUST00000119561 440 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm26490-201ENSMUST00000157879 140 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm23318-201ENSMUST00000158000 108 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm22119-201ENSMUST00000175594 99 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Mir7022-201ENSMUST00000183749 61 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm44474-201ENSMUST00000196525 127 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm45857-201ENSMUST00000212207 356 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.14□□□□□ -1.43
Shank3Q4ACU6 Gm14725-201ENSMUST00000120324 828 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm22986-201ENSMUST00000122753 130 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm22326-201ENSMUST00000158897 351 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm13249-201ENSMUST00000177803 345 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm13144-201ENSMUST00000179385 345 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm45722-201ENSMUST00000213075 466 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm12112-201ENSMUST00000117772 231 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm13501-201ENSMUST00000118477 979 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Shank3Q4ACU6 Gm37115-201ENSMUST00000193750 2849 ntBASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Shank3Q4ACU6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms