Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm24429-201ENSMUST00000104076 132 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm26318-201ENSMUST00000176507 96 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm8669-201ENSMUST00000183839 945 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm2950-201ENSMUST00000185530 520 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm37421-201ENSMUST00000193088 132 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm4602-201ENSMUST00000203198 308 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm45660-201ENSMUST00000210267 151 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Gm19189-201ENSMUST00000221689 754 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.99□□□□□ -1.61
Trafd1Q3UDK1 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm14575-201ENSMUST00000117210 560 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm12683-201ENSMUST00000117528 415 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm7206-201ENSMUST00000117730 508 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm15766-201ENSMUST00000118025 813 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm2199-201ENSMUST00000119065 874 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm25865-201ENSMUST00000158247 104 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm10319-202ENSMUST00000159439 846 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm33952-201ENSMUST00000197795 408 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm2623-201ENSMUST00000199229 286 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm42459-201ENSMUST00000199679 742 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm43794-201ENSMUST00000200971 692 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18468-201ENSMUST00000207321 369 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18470-201ENSMUST00000207467 420 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18465-201ENSMUST00000207468 369 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18464-201ENSMUST00000207803 420 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18458-201ENSMUST00000207908 369 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm18461-201ENSMUST00000208421 420 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm45690-201ENSMUST00000210775 246 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 AV026068-237ENSMUST00000226075 572 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trafd1Q3UDK1 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm24170-201ENSMUST00000104124 133 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm8129-201ENSMUST00000118230 213 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm14082-201ENSMUST00000118582 801 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm14619-201ENSMUST00000120480 168 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm14065-201ENSMUST00000120848 585 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm14369-201ENSMUST00000121355 285 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Olfr331-202ENSMUST00000170501 957 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm22852-201ENSMUST00000177899 101 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm8614-201ENSMUST00000182528 978 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm18728-201ENSMUST00000186155 753 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm28976-201ENSMUST00000188070 144 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms