Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.22□□□□□ -1.25
Rfx1P48377 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Gm7646-201ENSMUST00000198590 1346 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC7.22□□□□□ -1.25
Rfx1P48377 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Rfx1P48377 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Rfx1P48377 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Rfx1P48377 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Rfx1P48377 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Rfx1P48377 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Rfx1P48377 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Rfx1P48377 Gm37137-201ENSMUST00000195138 2684 ntBASIC7.21□□□□□ -1.25
Rfx1P48377 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm12016-201ENSMUST00000119079 681 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm13009-201ENSMUST00000121307 267 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm13602-201ENSMUST00000122405 493 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Mir5106-201ENSMUST00000174936 73 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Mir5128-201ENSMUST00000175217 84 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm5430-201ENSMUST00000182525 915 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm27185-201ENSMUST00000184296 247 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Gm7897-201ENSMUST00000193981 554 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rfx1P48377 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC7.21□□□□□ -1.26
Rfx1P48377 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rfx1P48377 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.21□□□□□ -1.26
Rfx1P48377 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.21□□□□□ -1.26
Rfx1P48377 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rfx1P48377 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 AC159896.3-201ENSMUST00000215904 3835 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC7.2□□□□□ -1.26
Rfx1P48377 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm22231-201ENSMUST00000101027 73 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm12565-201ENSMUST00000119004 649 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm16445-201ENSMUST00000120399 714 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm5646-201ENSMUST00000120568 714 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm23352-201ENSMUST00000158428 64 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm6434-201ENSMUST00000163316 372 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Igkv17-134-201ENSMUST00000168310 348 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm15143-201ENSMUST00000178180 714 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm5947-201ENSMUST00000179156 714 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm25617-201ENSMUST00000179548 133 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm5645-201ENSMUST00000179597 714 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms