Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
Cdx2P43241 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx2P43241 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm22488-201ENSMUST00000116811 127 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Gm14065-201ENSMUST00000120848 585 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx2P43241 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm24113-201ENSMUST00000157477 276 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Gm22160-201ENSMUST00000158405 328 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm19898-201ENSMUST00000177490 251 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm29161-201ENSMUST00000188250 699 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Gm37719-201ENSMUST00000194615 292 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Gm46327-201ENSMUST00000218240 365 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx2P43241 AC154283.1-201ENSMUST00000228417 389 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx2P43241 Olfr881-201ENSMUST00000074611 948 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Cdx2P43241 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx2P43241 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.81□□□□□ -1.64
Cdx2P43241 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm14756-201ENSMUST00000116395 240 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm12683-201ENSMUST00000117528 415 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm13745-201ENSMUST00000121994 527 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm25427-201ENSMUST00000157605 103 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm5777-201ENSMUST00000177265 448 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm27528-201ENSMUST00000183544 205 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm27688-201ENSMUST00000183634 91 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.8□□□□□ -1.64
Cdx2P43241 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm5372-201ENSMUST00000187540 409 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm21856-201ENSMUST00000187547 696 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm21735-201ENSMUST00000190360 696 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm10292-202ENSMUST00000193165 585 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm18382-201ENSMUST00000194394 582 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm43350-201ENSMUST00000196382 711 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm2622-201ENSMUST00000200018 471 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.8□□□□□ -1.64
Cdx2P43241 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.8□□□□□ -1.64
Cdx2P43241 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Cdx2P43241 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx2P43241 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx2P43241 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx2P43241 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdx2P43241 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.8□□□□□ -1.64
Cdx2P43241 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cdx2P43241 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms