Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm11914-201ENSMUST00000117094 507 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm12717-201ENSMUST00000118427 983 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm14716-201ENSMUST00000120138 718 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm5383-201ENSMUST00000121177 617 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm12413-201ENSMUST00000121508 312 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm22613-201ENSMUST00000122679 292 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm24745-201ENSMUST00000157840 85 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm25348-201ENSMUST00000158961 111 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm6673-201ENSMUST00000166114 700 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm8993-201ENSMUST00000182182 983 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm43084-201ENSMUST00000200696 947 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm44138-201ENSMUST00000204939 271 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.17□□□□□ -1.58
Cxcl12P40224 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.17□□□□□ -1.58
Cxcl12P40224 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cxcl12P40224 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm23594-201ENSMUST00000104307 134 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm12994-201ENSMUST00000119601 447 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm5942-201ENSMUST00000120046 439 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm13232-201ENSMUST00000121816 632 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm3077-201ENSMUST00000165903 627 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm38053-201ENSMUST00000193938 160 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm44234-201ENSMUST00000204246 900 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm23928-201ENSMUST00000082469 145 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.16□□□□□ -1.58
Cxcl12P40224 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.16□□□□□ -1.58
Cxcl12P40224 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cxcl12P40224 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Cxcl12P40224 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cxcl12P40224 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Cxcl12P40224 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Cxcl12P40224 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Cxcl12P40224 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.15□□□□□ -1.58
Cxcl12P40224 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Cxcl12P40224 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cxcl12P40224 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms