Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Gm23692-201ENSMUST00000101881 160 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Traf1P39428 Gm14831-201ENSMUST00000120253 409 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Gm12422-201ENSMUST00000121431 302 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.06□□□□□ -1.44
Traf1P39428 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Gm37631-201ENSMUST00000192275 364 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Mir6516-201ENSMUST00000196236 110 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Gm43408-201ENSMUST00000198263 440 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Gm44214-201ENSMUST00000204153 606 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Traf1P39428 Gm20074-201ENSMUST00000208144 484 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.06□□□□□ -1.44
Traf1P39428 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.06□□□□□ -1.44
Traf1P39428 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Traf1P39428 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Traf1P39428 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Traf1P39428 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Traf1P39428 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.06□□□□□ -1.44
Traf1P39428 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Traf1P39428 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Traf1P39428 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Traf1P39428 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Traf1P39428 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Traf1P39428 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.05□□□□□ -1.44
Traf1P39428 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.05□□□□□ -1.44
Traf1P39428 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Traf1P39428 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm8993-201ENSMUST00000182182 983 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Traf1P39428 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm23623-201ENSMUST00000082461 107 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Traf1P39428 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.05□□□□□ -1.44
Traf1P39428 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.05□□□□□ -1.44
Traf1P39428 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Traf1P39428 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Traf1P39428 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Traf1P39428 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms