Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm15185-201ENSMUST00000117397 746 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm12683-201ENSMUST00000117528 415 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm14943-201ENSMUST00000118056 546 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm11759-201ENSMUST00000121742 464 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm9671-201ENSMUST00000171502 547 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm7952-201ENSMUST00000180540 984 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm27148-201ENSMUST00000185086 160 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm20915-201ENSMUST00000191575 663 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm6064-201ENSMUST00000203999 454 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm45636-201ENSMUST00000210497 1064 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm46103-201ENSMUST00000217614 341 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm272-201ENSMUST00000222073 919 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.31□□□□□ -1.56
Hcn3O88705 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hcn3O88705 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 AC154681.1-201ENSMUST00000225876 1735 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hcn3O88705 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hcn3O88705 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.31□□□□□ -1.56
Hcn3O88705 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hcn3O88705 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Hcn3O88705 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hcn3O88705 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hcn3O88705 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Mir449c-201ENSMUST00000102192 109 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm25345-201ENSMUST00000104505 133 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm11719-201ENSMUST00000119399 351 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm13508-201ENSMUST00000121639 775 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm12885-201ENSMUST00000122246 328 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm26106-201ENSMUST00000157254 228 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.3□□□□□ -1.56
Hcn3O88705 Mir6921-201ENSMUST00000183719 80 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm18444-201ENSMUST00000191239 629 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm36986-201ENSMUST00000195320 353 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Gm43717-201ENSMUST00000198684 310 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm7802-201ENSMUST00000216464 262 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hcn3O88705 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hcn3O88705 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hcn3O88705 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hcn3O88705 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.3□□□□□ -1.56
Hcn3O88705 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hcn3O88705 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms