Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC3.97□□□□□ -1.77
Hmgb3O54879 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC3.97□□□□□ -1.77
Hmgb3O54879 AC123534.1-201ENSMUST00000224060 656 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 AC160980.2-201ENSMUST00000225131 949 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 CT009515.3-201ENSMUST00000226509 671 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 n-R5s215-201ENSMUST00000082480 104 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm20287-201ENSMUST00000172848 2367 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
Hmgb3O54879 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Hmgb3O54879 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC3.96□□□□□ -1.78
Hmgb3O54879 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Mir466i-201ENSMUST00000116924 121 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm12261-201ENSMUST00000117499 645 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm15166-201ENSMUST00000120790 385 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm14587-201ENSMUST00000121714 658 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm25489-201ENSMUST00000158727 141 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm8183-201ENSMUST00000183134 980 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm38015-201ENSMUST00000193048 188 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm9442-201ENSMUST00000194242 319 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm37235-201ENSMUST00000195171 59 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Igkv4-75-201ENSMUST00000197204 359 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm44485-201ENSMUST00000199569 137 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm3148-201ENSMUST00000203594 612 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm44171-201ENSMUST00000203701 2109 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm45215-201ENSMUST00000206407 395 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm45269-201ENSMUST00000210359 282 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm7499-201ENSMUST00000210423 813 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Zfp429-203ENSMUST00000224684 524 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 AC133203.1-201ENSMUST00000228241 301 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 AC120375.2-202ENSMUST00000228722 397 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm8526-201ENSMUST00000079153 475 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm24763-201ENSMUST00000083688 190 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Gm3675-201ENSMUST00000175904 1653 ntBASIC3.96□□□□□ -1.78
Hmgb3O54879 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb3O54879 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Hmgb3O54879 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm15357-201ENSMUST00000119160 285 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm12482-201ENSMUST00000120435 630 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm15267-201ENSMUST00000120888 464 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmgb3O54879 Mir3095-201ENSMUST00000175552 87 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm27854-201ENSMUST00000175578 244 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm29663-201ENSMUST00000186962 853 ntBASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmgb3O54879 Gm29755-201ENSMUST00000196976 948 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms