Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Gm12896-201ENSMUST00000118430 226 ntBASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
H2afb2S4R1M3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
H2afb2S4R1M3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
H2afb2S4R1M3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.71■□□□□ 0.42
H2afb2S4R1M3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
H2afb2S4R1M3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb2S4R1M3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
H2afb2S4R1M3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gm12441-201ENSMUST00000121806 588 ntBASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.68■□□□□ 0.42
H2afb2S4R1M3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.68■□□□□ 0.42
H2afb2S4R1M3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.67■□□□□ 0.42
H2afb2S4R1M3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb2S4R1M3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.66■□□□□ 0.42
H2afb2S4R1M3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms