Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Mir2861-201ENSMUST00000175539 82 ntBASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Mir6349-201ENSMUST00000184059 97 ntBASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Mtag2-201ENSMUST00000058665 714 ntBASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc45Q9Z1X9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Gm8969-201ENSMUST00000199694 526 ntBASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc45Q9Z1X9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Gm13158-201ENSMUST00000122007 736 ntBASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdc45Q9Z1X9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdc45Q9Z1X9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.57■□□□□ 0.88
Cdc45Q9Z1X9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdc45Q9Z1X9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdc45Q9Z1X9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdc45Q9Z1X9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdc45Q9Z1X9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc45Q9Z1X9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc45Q9Z1X9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Gm15375-201ENSMUST00000119510 849 ntBASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc45Q9Z1X9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms