Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp6ap1Q9R1Q9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp6ap1Q9R1Q9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp6ap1Q9R1Q9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atp6ap1Q9R1Q9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.29■□□□□ 0.36
Atp6ap1Q9R1Q9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp6ap1Q9R1Q9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms