Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.02■□□□□ 0.48
Tubd1Q9R1K7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubd1Q9R1K7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tubd1Q9R1K7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubd1Q9R1K7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tubd1Q9R1K7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubd1Q9R1K7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubd1Q9R1K7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubd1Q9R1K7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tubd1Q9R1K7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tubd1Q9R1K7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms