Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl28Q9JIL2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Gm26571-201ENSMUST00000181399 666 ntBASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl28Q9JIL2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Gm42569-201ENSMUST00000200539 472 ntBASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl28Q9JIL2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Gm8495-201ENSMUST00000188740 694 ntBASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl28Q9JIL2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl28Q9JIL2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl28Q9JIL2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl28Q9JIL2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl28Q9JIL2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl28Q9JIL2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Gm6365-201ENSMUST00000054711 744 ntBASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl28Q9JIL2 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms