Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Copb1Q9JIF7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.38■□□□□ 0.69
Copb1Q9JIF7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb1Q9JIF7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Copb1Q9JIF7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Copb1Q9JIF7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Copb1Q9JIF7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.38■□□□□ 0.69
Copb1Q9JIF7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Gm38285-201ENSMUST00000192928 922 ntBASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Copb1Q9JIF7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Gm10849-201ENSMUST00000100397 618 ntBASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Gm6211-202ENSMUST00000167849 925 ntBASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Copb1Q9JIF7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Copb1Q9JIF7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Gm2399-201ENSMUST00000104944 225 ntBASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Copb1Q9JIF7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.33■□□□□ 0.69
Copb1Q9JIF7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms