Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a3bpQ9EQG9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a3bpQ9EQG9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col4a3bpQ9EQG9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a3bpQ9EQG9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col4a3bpQ9EQG9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a3bpQ9EQG9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a3bpQ9EQG9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a3bpQ9EQG9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Gm38285-201ENSMUST00000192928 922 ntBASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a3bpQ9EQG9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Gm37856-201ENSMUST00000191634 999 ntBASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col4a3bpQ9EQG9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a3bpQ9EQG9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a3bpQ9EQG9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Gm2399-201ENSMUST00000104944 225 ntBASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col4a3bpQ9EQG9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms