Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cfap53Q9D439 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap53Q9D439 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap53Q9D439 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap53Q9D439 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap53Q9D439 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap53Q9D439 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.41■□□□□ 0.7
Cfap53Q9D439 Gm12441-201ENSMUST00000121806 588 ntBASIC19.41■□□□□ 0.7
Cfap53Q9D439 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
Cfap53Q9D439 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cfap53Q9D439 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Gm12896-201ENSMUST00000118430 226 ntBASIC19.4■□□□□ 0.7
Cfap53Q9D439 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap53Q9D439 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cfap53Q9D439 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cfap53Q9D439 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cfap53Q9D439 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.39■□□□□ 0.69
Cfap53Q9D439 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cfap53Q9D439 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Dio3-201ENSMUST00000097228 1449 ntBASIC19.38■□□□□ 0.69
Cfap53Q9D439 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap53Q9D439 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.37■□□□□ 0.69
Cfap53Q9D439 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap53Q9D439 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.36■□□□□ 0.69
Cfap53Q9D439 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms