Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.08■□□□□ 0.97
Stag1Q9D3E6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stag1Q9D3E6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Stag1Q9D3E6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stag1Q9D3E6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.08■□□□□ 0.96
Stag1Q9D3E6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag1Q9D3E6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Stag1Q9D3E6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag1Q9D3E6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Stag1Q9D3E6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Gm13401-201ENSMUST00000117074 291 ntBASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Gm2274-201ENSMUST00000184539 609 ntBASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag1Q9D3E6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.06■□□□□ 0.96
Stag1Q9D3E6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.05■□□□□ 0.96
Stag1Q9D3E6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Gm18032-201ENSMUST00000222541 538 ntBASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag1Q9D3E6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Mir5130-201ENSMUST00000175160 84 ntBASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Gm29791-202ENSMUST00000207888 369 ntBASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stag1Q9D3E6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Gm24841-201ENSMUST00000158676 357 ntBASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms