Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rita1Q9D1H0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Gm5417-201ENSMUST00000079706 384 ntBASIC16.31■□□□□ 0.2
Rita1Q9D1H0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rita1Q9D1H0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Gm15565-201ENSMUST00000118890 427 ntBASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rita1Q9D1H0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Gm12085-201ENSMUST00000119263 940 ntBASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
Rita1Q9D1H0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Gm21814-202ENSMUST00000203277 873 ntBASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rita1Q9D1H0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.27■□□□□ 0.2
Rita1Q9D1H0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.27■□□□□ 0.2
Rita1Q9D1H0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rita1Q9D1H0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rita1Q9D1H0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rita1Q9D1H0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rita1Q9D1H0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms