Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd2Q9CZB3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd2Q9CZB3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Gm6211-202ENSMUST00000167849 925 ntBASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd2Q9CZB3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd2Q9CZB3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Thumpd2Q9CZB3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd2Q9CZB3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd2Q9CZB3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd2Q9CZB3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd2Q9CZB3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd2Q9CZB3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Thumpd2Q9CZB3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms