Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf135Q9CWS1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf135Q9CWS1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf135Q9CWS1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf135Q9CWS1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf135Q9CWS1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf135Q9CWS1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Gm13168-201ENSMUST00000121771 632 ntBASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Gm6211-202ENSMUST00000167849 925 ntBASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Gm10252-201ENSMUST00000209541 832 ntBASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf135Q9CWS1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf135Q9CWS1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf135Q9CWS1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf135Q9CWS1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Gm20049-201ENSMUST00000219950 730 ntBASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf135Q9CWS1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf135Q9CWS1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf135Q9CWS1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms