Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.53■□□□□ 0.4
Trim33Q99PP7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.53■□□□□ 0.4
Trim33Q99PP7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Trim33Q99PP7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim33Q99PP7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.52■□□□□ 0.4
Trim33Q99PP7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.52■□□□□ 0.4
Trim33Q99PP7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.52■□□□□ 0.4
Trim33Q99PP7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.52■□□□□ 0.4
Trim33Q99PP7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trim33Q99PP7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.52■□□□□ 0.4
Trim33Q99PP7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim33Q99PP7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim33Q99PP7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim33Q99PP7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim33Q99PP7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim33Q99PP7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.5■□□□□ 0.39
Trim33Q99PP7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim33Q99PP7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.49■□□□□ 0.39
Trim33Q99PP7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.49■□□□□ 0.39
Trim33Q99PP7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.49■□□□□ 0.39
Trim33Q99PP7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim33Q99PP7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms