Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.83■□□□□ 0.45
Cdk9Q99J95 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.83■□□□□ 0.45
Cdk9Q99J95 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cdk9Q99J95 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cdk9Q99J95 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cdk9Q99J95 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cdk9Q99J95 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.82■□□□□ 0.44
Cdk9Q99J95 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk9Q99J95 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.81■□□□□ 0.44
Cdk9Q99J95 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Tgds-204ENSMUST00000228543 1594 ntBASIC17.81■□□□□ 0.44
Cdk9Q99J95 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.81■□□□□ 0.44
Cdk9Q99J95 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.81■□□□□ 0.44
Cdk9Q99J95 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk9Q99J95 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.8■□□□□ 0.44
Cdk9Q99J95 Gm43060-201ENSMUST00000200621 289 ntBASIC17.8■□□□□ 0.44
Cdk9Q99J95 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.8■□□□□ 0.44
Cdk9Q99J95 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.8■□□□□ 0.44
Cdk9Q99J95 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdk9Q99J95 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk9Q99J95 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms