Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha3Q91Y16 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdha3Q91Y16 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Gm10138-203ENSMUST00000206952 366 ntBASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha3Q91Y16 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Gm10812-201ENSMUST00000099864 546 ntBASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha3Q91Y16 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Idnk-204ENSMUST00000226010 1898 ntBASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha3Q91Y16 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms