Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac2Q91Y09 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.25■□□□□ 0.67
Pcdhac2Q91Y09 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac2Q91Y09 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.23■□□□□ 0.67
Pcdhac2Q91Y09 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Gm7284-201ENSMUST00000131667 944 ntBASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhac2Q91Y09 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Gm9103-201ENSMUST00000119371 405 ntBASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhac2Q91Y09 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Gm16061-201ENSMUST00000122167 857 ntBASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Gm17661-201ENSMUST00000170317 270 ntBASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhac2Q91Y09 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms