Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb1Q91XX8 Fst-202ENSMUST00000223640 2612 ntBASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb1Q91XX8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Gm13836-201ENSMUST00000121159 501 ntBASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb1Q91XX8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhgb1Q91XX8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb1Q91XX8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms