Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
StrcQ8VIM6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Gm45328-201ENSMUST00000210942 917 ntBASIC21.27■■□□□ 1
StrcQ8VIM6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
StrcQ8VIM6 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.27■■□□□ 1
StrcQ8VIM6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.27■■□□□ 1
StrcQ8VIM6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
StrcQ8VIM6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
StrcQ8VIM6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
StrcQ8VIM6 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.27■□□□□ 0.99
StrcQ8VIM6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
StrcQ8VIM6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Gm5864-201ENSMUST00000202263 970 ntBASIC21.26■□□□□ 0.99
StrcQ8VIM6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
StrcQ8VIM6 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.26■□□□□ 0.99
StrcQ8VIM6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
StrcQ8VIM6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
StrcQ8VIM6 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.24■□□□□ 0.99
StrcQ8VIM6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.24■□□□□ 0.99
StrcQ8VIM6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
StrcQ8VIM6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.23■□□□□ 0.99
StrcQ8VIM6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
StrcQ8VIM6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.22■□□□□ 0.99
StrcQ8VIM6 Gm18733-201ENSMUST00000173950 856 ntBASIC21.22■□□□□ 0.99
StrcQ8VIM6 Gm43347-201ENSMUST00000200226 580 ntBASIC21.22■□□□□ 0.99
StrcQ8VIM6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.22■□□□□ 0.99
StrcQ8VIM6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.22■□□□□ 0.99
StrcQ8VIM6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.21■□□□□ 0.99
StrcQ8VIM6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrcQ8VIM6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.2■□□□□ 0.98
StrcQ8VIM6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.2■□□□□ 0.98
StrcQ8VIM6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrcQ8VIM6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms