Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Gm27357-201ENSMUST00000183754 135 ntBASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.22■□□□□ 0.03
Cspg4Q8VHY0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 Gm43438-201ENSMUST00000198133 379 ntBASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cspg4Q8VHY0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Golph3-202ENSMUST00000226517 2359 ntBASIC15.21■□□□□ 0.02
Cspg4Q8VHY0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Auts2-212ENSMUST00000178555 309 ntBASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cspg4Q8VHY0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Gm27389-201ENSMUST00000183622 195 ntBASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cspg4Q8VHY0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Gm7370-201ENSMUST00000219471 767 ntBASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cspg4Q8VHY0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cspg4Q8VHY0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cspg4Q8VHY0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms