Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vmn1r28Q8R2C9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vmn1r28Q8R2C9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vmn1r28Q8R2C9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vmn1r28Q8R2C9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.23■□□□□ 0.19
Vmn1r28Q8R2C9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r28Q8R2C9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms