Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim5Q8CI51 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Gm2399-201ENSMUST00000104944 225 ntBASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim5Q8CI51 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Mir5133-201ENSMUST00000174955 77 ntBASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Gm26524-201ENSMUST00000192339 390 ntBASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Idnk-204ENSMUST00000226010 1898 ntBASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdlim5Q8CI51 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Zfp783-201ENSMUST00000095946 670 ntBASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim5Q8CI51 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.27■□□□□ 0.19
Pdlim5Q8CI51 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Rab3c-203ENSMUST00000224180 967 ntBASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.26■□□□□ 0.19
Pdlim5Q8CI51 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim5Q8CI51 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Flg-201ENSMUST00000050758 1488 ntBASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Gm12933-201ENSMUST00000120203 872 ntBASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms