Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.81■□□□□ 0.12
ShfQ8CG80 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm2399-201ENSMUST00000104944 225 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm7290-201ENSMUST00000104990 617 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm12918-201ENSMUST00000120234 636 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm15710-201ENSMUST00000121821 636 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm5075-201ENSMUST00000196916 622 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.8■□□□□ 0.12
ShfQ8CG80 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm6365-201ENSMUST00000054711 744 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.8■□□□□ 0.12
ShfQ8CG80 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
ShfQ8CG80 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ShfQ8CG80 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Gm5874-201ENSMUST00000096101 508 ntBASIC15.79■□□□□ 0.12
ShfQ8CG80 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.79■□□□□ 0.12
ShfQ8CG80 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ShfQ8CG80 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.78■□□□□ 0.12
ShfQ8CG80 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ShfQ8CG80 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.78■□□□□ 0.12
ShfQ8CG80 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.78■□□□□ 0.12
ShfQ8CG80 Gm7291-201ENSMUST00000199147 382 ntBASIC15.78■□□□□ 0.12
ShfQ8CG80 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.78■□□□□ 0.12
ShfQ8CG80 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ShfQ8CG80 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.78■□□□□ 0.12
ShfQ8CG80 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ShfQ8CG80 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ShfQ8CG80 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
ShfQ8CG80 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.77■□□□□ 0.12
ShfQ8CG80 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ShfQ8CG80 Gm6211-202ENSMUST00000167849 925 ntBASIC15.77■□□□□ 0.12
ShfQ8CG80 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.77■□□□□ 0.12
ShfQ8CG80 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms