Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Fam228aQ8CDW1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam228aQ8CDW1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam228aQ8CDW1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.63■□□□□ 0.57
Fam228aQ8CDW1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam228aQ8CDW1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam228aQ8CDW1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam228aQ8CDW1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam228aQ8CDW1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam228aQ8CDW1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Fam228aQ8CDW1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam228aQ8CDW1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam228aQ8CDW1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms