Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44357-201ENSMUST00000195897 142 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm19658-201ENSMUST00000196231 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44367-201ENSMUST00000196836 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44350-201ENSMUST00000197197 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44390-201ENSMUST00000197533 144 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44313-201ENSMUST00000198018 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44486-201ENSMUST00000198508 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44454-201ENSMUST00000198541 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44314-201ENSMUST00000199263 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44394-201ENSMUST00000199558 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44484-201ENSMUST00000199873 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44466-201ENSMUST00000200264 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm44359-201ENSMUST00000200671 138 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Gm32051-202ENSMUST00000197905 2385 ntBASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pabpn1Q8CCS6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Gm26308-201ENSMUST00000157768 69 ntBASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pabpn1Q8CCS6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Gm12260-201ENSMUST00000122447 411 ntBASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pabpn1Q8CCS6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pabpn1Q8CCS6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pabpn1Q8CCS6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pabpn1Q8CCS6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC27.58■■■□□ 2.01
Pabpn1Q8CCS6 Gm18856-201ENSMUST00000178096 1374 ntBASIC27.58■■■□□ 2.01
Pabpn1Q8CCS6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pabpn1Q8CCS6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pabpn1Q8CCS6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC27.56■■■□□ 2
Pabpn1Q8CCS6 Gm32996-201ENSMUST00000199828 1447 ntBASIC27.56■■■□□ 2
Pabpn1Q8CCS6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC27.56■■■□□ 2
Pabpn1Q8CCS6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Pabpn1Q8CCS6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.55■■■□□ 2
Pabpn1Q8CCS6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC27.55■■■□□ 2
Pabpn1Q8CCS6 Gm38345-201ENSMUST00000192635 1748 ntBASIC27.55■■■□□ 2
Pabpn1Q8CCS6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC27.55■■■□□ 2
Pabpn1Q8CCS6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pabpn1Q8CCS6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 AC151286.1-201ENSMUST00000198489 145 ntBASIC27.53■■■□□ 2
Pabpn1Q8CCS6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Gm37820-201ENSMUST00000194021 2147 ntBASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pabpn1Q8CCS6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Gm13830-205ENSMUST00000201195 1155 ntBASIC27.52■■■□□ 2
Pabpn1Q8CCS6 AC125350.1-201ENSMUST00000225115 903 ntBASIC27.52■■■□□ 2
Pabpn1Q8CCS6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pabpn1Q8CCS6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
Pabpn1Q8CCS6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Gm13127-201ENSMUST00000118978 1389 ntBASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pabpn1Q8CCS6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms