Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Gm18101-201ENSMUST00000215769 548 ntBASIC18.82■□□□□ 0.6
Fam78aQ8C552 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam78aQ8C552 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fam78aQ8C552 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Fst-202ENSMUST00000223640 2612 ntBASIC18.8■□□□□ 0.6
Fam78aQ8C552 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam78aQ8C552 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Gm16061-201ENSMUST00000122167 857 ntBASIC18.79■□□□□ 0.6
Fam78aQ8C552 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam78aQ8C552 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Gm33142-201ENSMUST00000193913 867 ntBASIC18.78■□□□□ 0.6
Fam78aQ8C552 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam78aQ8C552 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fam78aQ8C552 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fam78aQ8C552 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Fam78aQ8C552 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Gm7370-201ENSMUST00000219471 767 ntBASIC18.76■□□□□ 0.59
Fam78aQ8C552 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.76■□□□□ 0.59
Fam78aQ8C552 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam78aQ8C552 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.75■□□□□ 0.59
Fam78aQ8C552 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms