Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf3Q8C120 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.42■□□□□ 0.54
Sh3rf3Q8C120 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf3Q8C120 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf3Q8C120 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3rf3Q8C120 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf3Q8C120 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Mir2861-201ENSMUST00000175539 82 ntBASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.38■□□□□ 0.53
Sh3rf3Q8C120 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Gm37856-201ENSMUST00000191634 999 ntBASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf3Q8C120 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms