Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scfd1Q8BRF7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scfd1Q8BRF7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scfd1Q8BRF7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Gm7638-201ENSMUST00000121348 967 ntBASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Gm2274-201ENSMUST00000184539 609 ntBASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scfd1Q8BRF7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Gm45058-201ENSMUST00000205810 766 ntBASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.24■□□□□ 0.83
Scfd1Q8BRF7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scfd1Q8BRF7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scfd1Q8BRF7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scfd1Q8BRF7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Scfd1Q8BRF7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms