Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Gm37292-201ENSMUST00000192062 758 ntBASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Gm43183-201ENSMUST00000200632 547 ntBASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pum3Q8BKS9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Gm12382-201ENSMUST00000122005 922 ntBASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.73■□□□□ 0.59
Pum3Q8BKS9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
Pum3Q8BKS9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pum3Q8BKS9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pum3Q8BKS9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pum3Q8BKS9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Gm6576-201ENSMUST00000169678 883 ntBASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.69■□□□□ 0.58
Pum3Q8BKS9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms