Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc40Q8BI79 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ccdc40Q8BI79 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Gm26524-201ENSMUST00000192339 390 ntBASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc40Q8BI79 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Gm13148-201ENSMUST00000118892 745 ntBASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc40Q8BI79 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc40Q8BI79 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.54
Ccdc40Q8BI79 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc40Q8BI79 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc40Q8BI79 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc40Q8BI79 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms