Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf38Q8BI21 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf38Q8BI21 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf38Q8BI21 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Gm7291-201ENSMUST00000199147 382 ntBASIC17.04■□□□□ 0.32
Rnf38Q8BI21 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf38Q8BI21 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.03■□□□□ 0.32
Rnf38Q8BI21 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf38Q8BI21 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf38Q8BI21 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf38Q8BI21 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf38Q8BI21 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf38Q8BI21 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms