Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Gm24841-201ENSMUST00000158676 357 ntBASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptlc3Q8BG54 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptlc3Q8BG54 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sptlc3Q8BG54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptlc3Q8BG54 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sptlc3Q8BG54 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Grk6-206ENSMUST00000224995 2971 ntBASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Sptlc3Q8BG54 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Gm27463-201ENSMUST00000183569 57 ntBASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptlc3Q8BG54 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sptlc3Q8BG54 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sptlc3Q8BG54 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sptlc3Q8BG54 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptlc3Q8BG54 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms