Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Mir770-201ENSMUST00000103252 94 ntBASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Gm34391-201ENSMUST00000203706 907 ntBASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trnp1Q80ZI1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Gm37722-201ENSMUST00000193757 208 ntBASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Gm45328-201ENSMUST00000210942 917 ntBASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.01■□□□□ 0.79
Trnp1Q80ZI1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 AC164629.2-201ENSMUST00000217916 270 ntBASIC20■□□□□ 0.79
Trnp1Q80ZI1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trnp1Q80ZI1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Actl10-202ENSMUST00000226583 1501 ntBASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Gm6443-201ENSMUST00000203599 874 ntBASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trnp1Q80ZI1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Birc2-201ENSMUST00000054878 378 ntBASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.98■□□□□ 0.79
Trnp1Q80ZI1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Trnp1Q80ZI1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms