Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm5408-201ENSMUST00000197998 747 ntBASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc116Q80X53 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.32■□□□□ 0.36
Ccdc116Q80X53 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc116Q80X53 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc116Q80X53 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.3■□□□□ 0.36
Ccdc116Q80X53 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc116Q80X53 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms