Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim36Q80WG7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.1■□□□□ 0.33
Trim36Q80WG7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trim36Q80WG7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim36Q80WG7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.09■□□□□ 0.33
Trim36Q80WG7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim36Q80WG7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim36Q80WG7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim36Q80WG7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.08■□□□□ 0.32
Trim36Q80WG7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.08■□□□□ 0.32
Trim36Q80WG7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.08■□□□□ 0.32
Trim36Q80WG7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim36Q80WG7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.07■□□□□ 0.32
Trim36Q80WG7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.07■□□□□ 0.32
Trim36Q80WG7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim36Q80WG7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms