Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Timm23-208ENSMUST00000226683 750 ntBASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Flg-201ENSMUST00000050758 1488 ntBASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf38bQ80SY5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Gm17971-201ENSMUST00000190239 806 ntBASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf38bQ80SY5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm18959-201ENSMUST00000208954 655 ntBASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm18032-201ENSMUST00000222541 538 ntBASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf38bQ80SY5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf38bQ80SY5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Gm3375-201ENSMUST00000203929 796 ntBASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf38bQ80SY5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf38bQ80SY5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms