Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx4Q7TNK1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx4Q7TNK1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx4Q7TNK1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx4Q7TNK1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Rfx4Q7TNK1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rfx4Q7TNK1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Gm21956-201ENSMUST00000179946 522 ntBASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx4Q7TNK1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Gm8493-201ENSMUST00000196881 489 ntBASIC17■□□□□ 0.31
Rfx4Q7TNK1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx4Q7TNK1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rfx4Q7TNK1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms