Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.44□□□□□ -0.1
Vma21Q78T54 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Gm7514-201ENSMUST00000209475 934 ntBASIC14.43□□□□□ -0.1
Vma21Q78T54 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.43□□□□□ -0.1
Vma21Q78T54 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vma21Q78T54 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vma21Q78T54 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Vma21Q78T54 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vma21Q78T54 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vma21Q78T54 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.42□□□□□ -0.1
Vma21Q78T54 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.42□□□□□ -0.1
Vma21Q78T54 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vma21Q78T54 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vma21Q78T54 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.41□□□□□ -0.1
Vma21Q78T54 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vma21Q78T54 Gm18671-201ENSMUST00000214826 683 ntBASIC14.41□□□□□ -0.1
Vma21Q78T54 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.41□□□□□ -0.1
Vma21Q78T54 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vma21Q78T54 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.4□□□□□ -0.1
Vma21Q78T54 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vma21Q78T54 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vma21Q78T54 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms