Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg5Q71M36 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg5Q71M36 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cspg5Q71M36 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.29■□□□□ 0.52
Cspg5Q71M36 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.29■□□□□ 0.52
Cspg5Q71M36 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg5Q71M36 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cspg5Q71M36 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.28■□□□□ 0.52
Cspg5Q71M36 Gm12382-201ENSMUST00000122005 922 ntBASIC18.28■□□□□ 0.52
Cspg5Q71M36 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Gm18025-201ENSMUST00000221733 862 ntBASIC18.28■□□□□ 0.52
Cspg5Q71M36 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.28■□□□□ 0.52
Cspg5Q71M36 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg5Q71M36 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.27■□□□□ 0.52
Cspg5Q71M36 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Gm13559-201ENSMUST00000120476 863 ntBASIC18.27■□□□□ 0.52
Cspg5Q71M36 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg5Q71M36 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cspg5Q71M36 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms