Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn10aQ6QIY3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn10aQ6QIY3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn10aQ6QIY3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Scn10aQ6QIY3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn10aQ6QIY3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Scn10aQ6QIY3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn10aQ6QIY3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn10aQ6QIY3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Gm15794-201ENSMUST00000120182 631 ntBASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn10aQ6QIY3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Gm6623-201ENSMUST00000173570 544 ntBASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Mir8112-201ENSMUST00000184382 131 ntBASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn10aQ6QIY3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 AW822252-206ENSMUST00000208904 237 ntBASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Gm45328-201ENSMUST00000210942 917 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms