Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.92■■□□□ 1.1
Ddx58Q6Q899 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Ddx58Q6Q899 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx58Q6Q899 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx58Q6Q899 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx58Q6Q899 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.89■■□□□ 1.1
Ddx58Q6Q899 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx58Q6Q899 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx58Q6Q899 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.87■■□□□ 1.09
Ddx58Q6Q899 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx58Q6Q899 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Gm7638-201ENSMUST00000121348 967 ntBASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms